Cluster: HRGMv2_2947_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2947
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2947_29 | HRGMv2_2947_29_19 | 16084 | 16983 | + | 3.A.1.34.1 |
| TC | HRGMv2_2947_29 | HRGMv2_2947_29_20 | 16983 | 17792 | + | 3.A.1.34.1 |
| pfam | HRGMv2_2947_29 | HRGMv2_2947_29_21 | 17865 | 18368 | - | DNA_binding_1 | Methyltransf_1N |
| TC | HRGMv2_2947_29 | HRGMv2_2947_29_22 | 18410 | 19345 | - | 1.A.35.3.2 |
| CAZyme | HRGMv2_2947_29 | HRGMv2_2947_29_23 | 19500 | 21458 | + | GH2 |
Gene ID: HRGMv2_2947_29_19
Type: TC
Location: 16084 - 16983 (+)
Type: TC
Location: 16084 - 16983 (+)
Gene ID: HRGMv2_2947_29_20
Type: TC
Location: 16983 - 17792 (+)
Type: TC
Location: 16983 - 17792 (+)
Gene ID: HRGMv2_2947_29_21
Type: pfam
Location: 17865 - 18368 (-)
Type: pfam
Location: 17865 - 18368 (-)
Gene ID: HRGMv2_2947_29_22
Type: TC
Location: 18410 - 19345 (-)
Type: TC
Location: 18410 - 19345 (-)
Gene ID: HRGMv2_2947_29_23
Type: CAZyme
Location: 19500 - 21458 (+)
Type: CAZyme
Location: 19500 - 21458 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.