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Cluster: HRGMv2_2941_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2941_6 HRGMv2_2941_6_46 49745 52126 - GH3
pfam HRGMv2_2941_6 HRGMv2_2941_6_47 52388 53860 - tRNA-synt_1c | Anticodon_2
pfam HRGMv2_2941_6 HRGMv2_2941_6_48 54115 55128 + tRNA-synt_1b
TC HRGMv2_2941_6 HRGMv2_2941_6_49 55166 56275 + 9.B.146.1.4
pfam HRGMv2_2941_6 HRGMv2_2941_6_50 56268 57416 + Epimerase_2
TC HRGMv2_2941_6 HRGMv2_2941_6_51 57693 58427 - 2.A.5.5.2
NULL(UNKNOWN) HRGMv2_2941_6 HRGMv2_2941_6_52 58507 59211 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2941_6 HRGMv2_2941_6_53 59490 60554 + 2.A.120.1.11
Gene ID: HRGMv2_2941_6_46
Type: CAZyme
Location: 49745 - 52126 (-)
Gene ID: HRGMv2_2941_6_47
Type: pfam
Location: 52388 - 53860 (-)
Gene ID: HRGMv2_2941_6_48
Type: pfam
Location: 54115 - 55128 (+)
Gene ID: HRGMv2_2941_6_49
Type: TC
Location: 55166 - 56275 (+)
Gene ID: HRGMv2_2941_6_50
Type: pfam
Location: 56268 - 57416 (+)
Gene ID: HRGMv2_2941_6_51
Type: TC
Location: 57693 - 58427 (-)
Gene ID: HRGMv2_2941_6_52
Type:
Location: 58507 - 59211 (+)
Gene ID: HRGMv2_2941_6_53
Type: TC
Location: 59490 - 60554 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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