Cluster: HRGMv2_2941_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2941
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2941_1 | HRGMv2_2941_1_126 | 119263 | 119781 | - | 3.D.1.8.1 |
| pfam | HRGMv2_2941_1 | HRGMv2_2941_1_127 | 119781 | 120245 | - | SmpB |
| pfam | HRGMv2_2941_1 | HRGMv2_2941_1_128 | 120314 | 121111 | - | Hydrolase | PGP_phosphatase | Hydrolase_like | Hydrolase_6 |
| CAZyme | HRGMv2_2941_1 | HRGMv2_2941_1_129 | 121235 | 123541 | + | GH2 |
Gene ID: HRGMv2_2941_1_126
Type: TC
Location: 119263 - 119781 (-)
Type: TC
Location: 119263 - 119781 (-)
Gene ID: HRGMv2_2941_1_127
Type: pfam
Location: 119781 - 120245 (-)
Type: pfam
Location: 119781 - 120245 (-)
Gene ID: HRGMv2_2941_1_128
Type: pfam
Location: 120314 - 121111 (-)
Type: pfam
Location: 120314 - 121111 (-)
Gene ID: HRGMv2_2941_1_129
Type: CAZyme
Location: 121235 - 123541 (+)
Type: CAZyme
Location: 121235 - 123541 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
F23-B02
Species
F23-B02 sp004553495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.