dbCAN Logo

Cluster: HRGMv2_2941_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2941_9 HRGMv2_2941_9_81 86581 88272 - GH2
TC HRGMv2_2941_9 HRGMv2_2941_9_82 88552 89904 + 3.D.6.1.2
TC HRGMv2_2941_9 HRGMv2_2941_9_83 89901 90929 + 3.D.6.1.2
TC HRGMv2_2941_9 HRGMv2_2941_9_84 90929 91450 + 3.D.6.1.3
TC HRGMv2_2941_9 HRGMv2_2941_9_85 91463 92122 + 3.D.6.1.2
TC HRGMv2_2941_9 HRGMv2_2941_9_86 92122 92706 + 3.D.6.1.2
TC HRGMv2_2941_9 HRGMv2_2941_9_87 92722 93516 + 3.D.6.1.2
Gene ID: HRGMv2_2941_9_81
Type: CAZyme
Location: 86581 - 88272 (-)
Gene ID: HRGMv2_2941_9_82
Type: TC
Location: 88552 - 89904 (+)
Gene ID: HRGMv2_2941_9_83
Type: TC
Location: 89901 - 90929 (+)
Gene ID: HRGMv2_2941_9_84
Type: TC
Location: 90929 - 91450 (+)
Gene ID: HRGMv2_2941_9_85
Type: TC
Location: 91463 - 92122 (+)
Gene ID: HRGMv2_2941_9_86
Type: TC
Location: 92122 - 92706 (+)
Gene ID: HRGMv2_2941_9_87
Type: TC
Location: 92722 - 93516 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2941_9_82 vegetarian > vegan 1.20496 0.01054
HRGMv2_2941_9_84 vegetarian > vegan 1.27052 0.01054

🧭 Explore Read Mapping of CGC

← Back to Cluster List