Cluster: HRGMv2_2941_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2941
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2941_9 | HRGMv2_2941_9_20 | 16278 | 17624 | + | 2.A.22.5.2 |
| NULL(UNKNOWN) | HRGMv2_2941_9 | HRGMv2_2941_9_21 | 17664 | 18011 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2941_9 | HRGMv2_2941_9_22 | 18156 | 19253 | + | GH18 |
| pfam | HRGMv2_2941_9 | HRGMv2_2941_9_23 | 19290 | 20684 | - | FAD-depend_C |
| TC | HRGMv2_2941_9 | HRGMv2_2941_9_24 | 20917 | 21477 | + | 4.F.1.1.7 |
| pfam | HRGMv2_2941_9 | HRGMv2_2941_9_25 | 21474 | 21944 | + | CrtO |
| CAZyme | HRGMv2_2941_9 | HRGMv2_2941_9_26 | 21941 | 23995 | + | GT28 |
Gene ID: HRGMv2_2941_9_20
Type: TC
Location: 16278 - 17624 (+)
Type: TC
Location: 16278 - 17624 (+)
Gene ID: HRGMv2_2941_9_21
Type:
Location: 17664 - 18011 (-)
Type:
Location: 17664 - 18011 (-)
Gene ID: HRGMv2_2941_9_22
Type: CAZyme
Location: 18156 - 19253 (+)
Type: CAZyme
Location: 18156 - 19253 (+)
Gene ID: HRGMv2_2941_9_23
Type: pfam
Location: 19290 - 20684 (-)
Type: pfam
Location: 19290 - 20684 (-)
Gene ID: HRGMv2_2941_9_24
Type: TC
Location: 20917 - 21477 (+)
Type: TC
Location: 20917 - 21477 (+)
Gene ID: HRGMv2_2941_9_25
Type: pfam
Location: 21474 - 21944 (+)
Type: pfam
Location: 21474 - 21944 (+)
Gene ID: HRGMv2_2941_9_26
Type: CAZyme
Location: 21941 - 23995 (+)
Type: CAZyme
Location: 21941 - 23995 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
F23-B02
Species
F23-B02 sp004553495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2941_9_21 | vegetarian > vegan | 1.48277 | 0.01054 |