Cluster: HRGMv2_2940_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2940
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2940_11 | HRGMv2_2940_11_10 | 6770 | 8101 | - | 2.A.66.1.37 |
| pfam | HRGMv2_2940_11 | HRGMv2_2940_11_11 | 8271 | 9224 | - | DUF1980_C |
| TC | HRGMv2_2940_11 | HRGMv2_2940_11_12 | 9217 | 10329 | - | 9.B.10.1.1 |
| CAZyme | HRGMv2_2940_11 | HRGMv2_2940_11_13 | 10481 | 11692 | + | GH3 |
| pfam | HRGMv2_2940_11 | HRGMv2_2940_11_14 | 11871 | 12740 | + | DegV |
| TC | HRGMv2_2940_11 | HRGMv2_2940_11_15 | 12938 | 14113 | - | 2.A.4.7.3 |
Gene ID: HRGMv2_2940_11_10
Type: TC
Location: 6770 - 8101 (-)
Type: TC
Location: 6770 - 8101 (-)
Gene ID: HRGMv2_2940_11_11
Type: pfam
Location: 8271 - 9224 (-)
Type: pfam
Location: 8271 - 9224 (-)
Gene ID: HRGMv2_2940_11_12
Type: TC
Location: 9217 - 10329 (-)
Type: TC
Location: 9217 - 10329 (-)
Gene ID: HRGMv2_2940_11_13
Type: CAZyme
Location: 10481 - 11692 (+)
Type: CAZyme
Location: 10481 - 11692 (+)
Gene ID: HRGMv2_2940_11_14
Type: pfam
Location: 11871 - 12740 (+)
Type: pfam
Location: 11871 - 12740 (+)
Gene ID: HRGMv2_2940_11_15
Type: TC
Location: 12938 - 14113 (-)
Type: TC
Location: 12938 - 14113 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-103
Species
CAG-103 sp004556965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.