Cluster: HRGMv2_2940_CGC7
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2940
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2940_9 | HRGMv2_2940_9_30 | 27068 | 28081 | + | 9.B.146.1.6 |
| TC | HRGMv2_2940_9 | HRGMv2_2940_9_31 | 28108 | 29256 | + | 2.A.103.1.3 |
| CAZyme | HRGMv2_2940_9 | HRGMv2_2940_9_32 | 29284 | 30417 | + | GT28 |
Gene ID: HRGMv2_2940_9_30
Type: TC
Location: 27068 - 28081 (+)
Type: TC
Location: 27068 - 28081 (+)
Gene ID: HRGMv2_2940_9_31
Type: TC
Location: 28108 - 29256 (+)
Type: TC
Location: 28108 - 29256 (+)
Gene ID: HRGMv2_2940_9_32
Type: CAZyme
Location: 29284 - 30417 (+)
Type: CAZyme
Location: 29284 - 30417 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-103
Species
CAG-103 sp004556965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2940_9_30 | vegetarian > vegan | 1.12291 | 0.00454 |
| HRGMv2_2940_9_32 | vegetarian > omnivore | 1.16973 | 0.00050 |