Cluster: HRGMv2_2940_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2940
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2940_5 | HRGMv2_2940_5_35 | 40520 | 47791 | - | GH94 | GT84 |
| TF | HRGMv2_2940_5 | HRGMv2_2940_5_36 | 48418 | 48768 | + | HTH_10 |
| TC | HRGMv2_2940_5 | HRGMv2_2940_5_37 | 48774 | 50153 | + | 3.A.5.2.2 |
Gene ID: HRGMv2_2940_5_35
Type: CAZyme
Location: 40520 - 47791 (-)
Type: CAZyme
Location: 40520 - 47791 (-)
Gene ID: HRGMv2_2940_5_36
Type: TF
Location: 48418 - 48768 (+)
Type: TF
Location: 48418 - 48768 (+)
Gene ID: HRGMv2_2940_5_37
Type: TC
Location: 48774 - 50153 (+)
Type: TC
Location: 48774 - 50153 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-103
Species
CAG-103 sp004556965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.