Cluster: HRGMv2_2940_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2940
- CGC Family ID: CGCFAM_01699
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2940_5 | HRGMv2_2940_5_18 | 23376 | 25508 | - | GT51 |
| NULL(UNKNOWN) | HRGMv2_2940_5 | HRGMv2_2940_5_19 | 25688 | 26011 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2940_5 | HRGMv2_2940_5_20 | 26077 | 26361 | + | DUF1292 |
| TC | HRGMv2_2940_5 | HRGMv2_2940_5_21 | 26830 | 27708 | + | 2.A.4.7.9 |
Gene ID: HRGMv2_2940_5_18
Type: CAZyme
Location: 23376 - 25508 (-)
Type: CAZyme
Location: 23376 - 25508 (-)
Gene ID: HRGMv2_2940_5_19
Type:
Location: 25688 - 26011 (+)
Type:
Location: 25688 - 26011 (+)
Gene ID: HRGMv2_2940_5_20
Type: pfam
Location: 26077 - 26361 (+)
Type: pfam
Location: 26077 - 26361 (+)
Gene ID: HRGMv2_2940_5_21
Type: TC
Location: 26830 - 27708 (+)
Type: TC
Location: 26830 - 27708 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-103
Species
CAG-103 sp004556965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2940_5_18 | vegetarian > omnivore | 1.13568 | 0.00050 |
| HRGMv2_2940_5_21 | vegetarian > omnivore | 1.45253 | 0.00050 |