Cluster: HRGMv2_2940_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2940
- CGC Family ID: CGCFAM_00245
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2940_1 | HRGMv2_2940_1_84 | 96775 | 97833 | + | 3.A.1.34.1 |
| TC | HRGMv2_2940_1 | HRGMv2_2940_1_85 | 97901 | 98851 | + | 3.A.1.34.1 |
| TC | HRGMv2_2940_1 | HRGMv2_2940_1_86 | 98844 | 99659 | + | 3.A.1.34.1 |
| CAZyme | HRGMv2_2940_1 | HRGMv2_2940_1_87 | 100017 | 100979 | + | GT2 |
Gene ID: HRGMv2_2940_1_84
Type: TC
Location: 96775 - 97833 (+)
Type: TC
Location: 96775 - 97833 (+)
Gene ID: HRGMv2_2940_1_85
Type: TC
Location: 97901 - 98851 (+)
Type: TC
Location: 97901 - 98851 (+)
Gene ID: HRGMv2_2940_1_86
Type: TC
Location: 98844 - 99659 (+)
Type: TC
Location: 98844 - 99659 (+)
Gene ID: HRGMv2_2940_1_87
Type: CAZyme
Location: 100017 - 100979 (+)
Type: CAZyme
Location: 100017 - 100979 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-103
Species
CAG-103 sp004556965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2940_1_87 | vegan > omnivore | 1.07547 | 0.03201 |