Cluster: HRGMv2_2940_CGC17
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2940
- CGC Family ID: CGCFAM_06187
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2940_55 | HRGMv2_2940_55_2 | 858 | 2987 | + | 3.A.1.135.6 |
| TC | HRGMv2_2940_55 | HRGMv2_2940_55_3 | 2991 | 4802 | + | 3.A.1.135.6 |
| CAZyme | HRGMv2_2940_55 | HRGMv2_2940_55_4 | 5128 | 6237 | + | GT28 |
Gene ID: HRGMv2_2940_55_2
Type: TC
Location: 858 - 2987 (+)
Type: TC
Location: 858 - 2987 (+)
Gene ID: HRGMv2_2940_55_3
Type: TC
Location: 2991 - 4802 (+)
Type: TC
Location: 2991 - 4802 (+)
Gene ID: HRGMv2_2940_55_4
Type: CAZyme
Location: 5128 - 6237 (+)
Type: CAZyme
Location: 5128 - 6237 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-103
Species
CAG-103 sp004556965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.