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Cluster: HRGMv2_2940_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2940_13 HRGMv2_2940_13_1 156 1436 - CBM50
peptidase HRGMv2_2940_13 HRGMv2_2940_13_2 1572 2588 + S55.001
STP HRGMv2_2940_13 HRGMv2_2940_13_3 3145 4839 - Fer4 | Fer4
TC HRGMv2_2940_13 HRGMv2_2940_13_4 4843 6729 - 3.D.1.5.1
TC HRGMv2_2940_13 HRGMv2_2940_13_5 6733 7209 - 3.D.1.5.1
pfam HRGMv2_2940_13 HRGMv2_2940_13_6 7622 7885 + TM1266-like
pfam HRGMv2_2940_13 HRGMv2_2940_13_7 7914 8939 + OpuAC | NMT1 | Phosphonate-bd
TC HRGMv2_2940_13 HRGMv2_2940_13_8 8936 9706 + 3.A.1.17.5
TC HRGMv2_2940_13 HRGMv2_2940_13_9 9699 10286 + 3.A.1.17.12
Gene ID: HRGMv2_2940_13_1
Type: CAZyme
Location: 156 - 1436 (-)
Gene ID: HRGMv2_2940_13_2
Type: peptidase
Location: 1572 - 2588 (+)
Gene ID: HRGMv2_2940_13_3
Type: STP
Location: 3145 - 4839 (-)
Gene ID: HRGMv2_2940_13_4
Type: TC
Location: 4843 - 6729 (-)
Gene ID: HRGMv2_2940_13_5
Type: TC
Location: 6733 - 7209 (-)
Gene ID: HRGMv2_2940_13_6
Type: pfam
Location: 7622 - 7885 (+)
Gene ID: HRGMv2_2940_13_7
Type: pfam
Location: 7914 - 8939 (+)
Gene ID: HRGMv2_2940_13_8
Type: TC
Location: 8936 - 9706 (+)
Gene ID: HRGMv2_2940_13_9
Type: TC
Location: 9699 - 10286 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2940_13_7 vegetarian > omnivore 1.24962 0.00050
HRGMv2_2940_13_7 vegetarian > vegan 1.19690 0.00454

🧭 Explore Read Mapping of CGC

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