dbCAN Logo

Cluster: HRGMv2_2939_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2939_2 HRGMv2_2939_2_75 81044 82366 + GH4
pfam HRGMv2_2939_2 HRGMv2_2939_2_76 82363 83100 + YdjC
TC HRGMv2_2939_2 HRGMv2_2939_2_77 83108 84217 + 3.A.1.1.22
TC HRGMv2_2939_2 HRGMv2_2939_2_78 84183 85310 + 3.A.1.1.7
TC HRGMv2_2939_2 HRGMv2_2939_2_79 85313 86239 + 3.A.1.1.11
Gene ID: HRGMv2_2939_2_75
Type: CAZyme
Location: 81044 - 82366 (+)
Gene ID: HRGMv2_2939_2_76
Type: pfam
Location: 82363 - 83100 (+)
Gene ID: HRGMv2_2939_2_77
Type: TC
Location: 83108 - 84217 (+)
Gene ID: HRGMv2_2939_2_78
Type: TC
Location: 84183 - 85310 (+)
Gene ID: HRGMv2_2939_2_79
Type: TC
Location: 85313 - 86239 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2939_2_77 vegetarian > vegan 1.00919 0.00029
HRGMv2_2939_2_78 vegetarian > vegan 1.11972 0.00029
HRGMv2_2939_2_79 vegetarian > vegan 1.34291 0.00029

🧭 Explore Read Mapping of CGC

← Back to Cluster List