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Cluster: HRGMv2_2939_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2939_24 HRGMv2_2939_24_6 3992 4789 - 3.A.1.25.6
TC HRGMv2_2939_24 HRGMv2_2939_24_7 4786 5643 - 3.A.1.25.6
TC HRGMv2_2939_24 HRGMv2_2939_24_8 5628 6449 - 3.A.1.28.2
STP HRGMv2_2939_24 HRGMv2_2939_24_9 6723 7706 - HD
pfam HRGMv2_2939_24 HRGMv2_2939_24_10 7826 8824 + WYL
CAZyme HRGMv2_2939_24 HRGMv2_2939_24_11 8867 10141 - GH13
TC HRGMv2_2939_24 HRGMv2_2939_24_12 10290 11351 + 9.A.23.1.1
pfam HRGMv2_2939_24 HRGMv2_2939_24_13 11487 11744 + DUF6110
TC HRGMv2_2939_24 HRGMv2_2939_24_14 11817 13913 + 3.A.3.32.3
pfam HRGMv2_2939_24 HRGMv2_2939_24_15 14033 14782 + SpoU_methylase | MRM3-like_sub_bind
pfam HRGMv2_2939_24 HRGMv2_2939_24_16 14804 16027 + DNA_processg_A | DprA_WH | LDcluster4
TC HRGMv2_2939_24 HRGMv2_2939_24_17 16049 18340 + 3.A.7.7.1
Gene ID: HRGMv2_2939_24_6
Type: TC
Location: 3992 - 4789 (-)
Gene ID: HRGMv2_2939_24_7
Type: TC
Location: 4786 - 5643 (-)
Gene ID: HRGMv2_2939_24_8
Type: TC
Location: 5628 - 6449 (-)
Gene ID: HRGMv2_2939_24_9
Type: STP
Location: 6723 - 7706 (-)
Gene ID: HRGMv2_2939_24_10
Type: pfam
Location: 7826 - 8824 (+)
Gene ID: HRGMv2_2939_24_11
Type: CAZyme
Location: 8867 - 10141 (-)
Gene ID: HRGMv2_2939_24_12
Type: TC
Location: 10290 - 11351 (+)
Gene ID: HRGMv2_2939_24_13
Type: pfam
Location: 11487 - 11744 (+)
Gene ID: HRGMv2_2939_24_14
Type: TC
Location: 11817 - 13913 (+)
Gene ID: HRGMv2_2939_24_15
Type: pfam
Location: 14033 - 14782 (+)
Gene ID: HRGMv2_2939_24_16
Type: pfam
Location: 14804 - 16027 (+)
Gene ID: HRGMv2_2939_24_17
Type: TC
Location: 16049 - 18340 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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