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Cluster: HRGMv2_2939_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2939_1 HRGMv2_2939_1_104 105709 107976 - 3.A.9.1.2
pfam HRGMv2_2939_1 HRGMv2_2939_1_105 108043 109212 - DUF5711
pfam HRGMv2_2939_1 HRGMv2_2939_1_106 109193 109966 - PseudoU_synth_1 | PseudoU_synth_1
TC HRGMv2_2939_1 HRGMv2_2939_1_107 109982 110785 - 3.A.1.26.7
TC HRGMv2_2939_1 HRGMv2_2939_1_108 110778 111644 - 3.A.1.26.7
TC HRGMv2_2939_1 HRGMv2_2939_1_109 111687 112535 - 3.A.1.26.7
pfam HRGMv2_2939_1 HRGMv2_2939_1_110 112546 113409 - Cons_hypoth95 | Methyltransf_15 | Methyltrans_SAM
CAZyme HRGMv2_2939_1 HRGMv2_2939_1_111 113421 115958 - GT51
Gene ID: HRGMv2_2939_1_104
Type: TC
Location: 105709 - 107976 (-)
Gene ID: HRGMv2_2939_1_105
Type: pfam
Location: 108043 - 109212 (-)
Gene ID: HRGMv2_2939_1_106
Type: pfam
Location: 109193 - 109966 (-)
Gene ID: HRGMv2_2939_1_107
Type: TC
Location: 109982 - 110785 (-)
Gene ID: HRGMv2_2939_1_108
Type: TC
Location: 110778 - 111644 (-)
Gene ID: HRGMv2_2939_1_109
Type: TC
Location: 111687 - 112535 (-)
Gene ID: HRGMv2_2939_1_110
Type: pfam
Location: 112546 - 113409 (-)
Gene ID: HRGMv2_2939_1_111
Type: CAZyme
Location: 113421 - 115958 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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