Cluster: HRGMv2_2939_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2939
- CGC Family ID: CGCFAM_06921
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2939_15 | HRGMv2_2939_15_41 | 37999 | 38727 | - | 3.A.1.132.6 |
| TF | HRGMv2_2939_15 | HRGMv2_2939_15_42 | 38720 | 39085 | - | GntR |
| NULL(UNKNOWN) | HRGMv2_2939_15 | HRGMv2_2939_15_43 | 39205 | 40608 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2939_15 | HRGMv2_2939_15_44 | 40740 | 42101 | - | 2.A.3.8.12 |
| pfam | HRGMv2_2939_15 | HRGMv2_2939_15_45 | 42296 | 42829 | - | DUF2284 |
| pfam | HRGMv2_2939_15 | HRGMv2_2939_15_46 | 42826 | 43839 | - | Asparaginase | Asparaginase_C |
| CAZyme | HRGMv2_2939_15 | HRGMv2_2939_15_47 | 43958 | 44890 | + | GT2 |
Gene ID: HRGMv2_2939_15_41
Type: TC
Location: 37999 - 38727 (-)
Type: TC
Location: 37999 - 38727 (-)
Gene ID: HRGMv2_2939_15_42
Type: TF
Location: 38720 - 39085 (-)
Type: TF
Location: 38720 - 39085 (-)
Gene ID: HRGMv2_2939_15_43
Type:
Location: 39205 - 40608 (-)
Type:
Location: 39205 - 40608 (-)
Gene ID: HRGMv2_2939_15_44
Type: TC
Location: 40740 - 42101 (-)
Type: TC
Location: 40740 - 42101 (-)
Gene ID: HRGMv2_2939_15_45
Type: pfam
Location: 42296 - 42829 (-)
Type: pfam
Location: 42296 - 42829 (-)
Gene ID: HRGMv2_2939_15_46
Type: pfam
Location: 42826 - 43839 (-)
Type: pfam
Location: 42826 - 43839 (-)
Gene ID: HRGMv2_2939_15_47
Type: CAZyme
Location: 43958 - 44890 (+)
Type: CAZyme
Location: 43958 - 44890 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia sp934667815
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.