Cluster: HRGMv2_2939_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2939
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2939_7 | HRGMv2_2939_7_19 | 27149 | 29626 | - | GH2 |
| TF | HRGMv2_2939_7 | HRGMv2_2939_7_20 | 29949 | 30839 | + | HTH_AraC |
| CAZyme | HRGMv2_2939_7 | HRGMv2_2939_7_21 | 30881 | 33085 | - | GH78 |
| pfam | HRGMv2_2939_7 | HRGMv2_2939_7_22 | 33241 | 35511 | - | CBM_X2 | Flg_new |
| NULL(UNKNOWN) | HRGMv2_2939_7 | HRGMv2_2939_7_23 | 36002 | 36547 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2939_7 | HRGMv2_2939_7_24 | 37022 | 38686 | + | 3.A.1.3.20 |
| TC | HRGMv2_2939_7 | HRGMv2_2939_7_25 | 38679 | 39413 | + | 3.A.1.3.20 |
Gene ID: HRGMv2_2939_7_19
Type: CAZyme
Location: 27149 - 29626 (-)
Type: CAZyme
Location: 27149 - 29626 (-)
Gene ID: HRGMv2_2939_7_20
Type: TF
Location: 29949 - 30839 (+)
Type: TF
Location: 29949 - 30839 (+)
Gene ID: HRGMv2_2939_7_21
Type: CAZyme
Location: 30881 - 33085 (-)
Type: CAZyme
Location: 30881 - 33085 (-)
Gene ID: HRGMv2_2939_7_22
Type: pfam
Location: 33241 - 35511 (-)
Type: pfam
Location: 33241 - 35511 (-)
Gene ID: HRGMv2_2939_7_23
Type:
Location: 36002 - 36547 (-)
Type:
Location: 36002 - 36547 (-)
Gene ID: HRGMv2_2939_7_24
Type: TC
Location: 37022 - 38686 (+)
Type: TC
Location: 37022 - 38686 (+)
Gene ID: HRGMv2_2939_7_25
Type: TC
Location: 38679 - 39413 (+)
Type: TC
Location: 38679 - 39413 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia sp934667815
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.