Cluster: HRGMv2_2939_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2939
- CGC Family ID: CGCFAM_09758
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2939_7 | HRGMv2_2939_7_9 | 7196 | 7912 | - | 3.A.1.1.22 |
| CAZyme | HRGMv2_2939_7 | HRGMv2_2939_7_10 | 7914 | 9815 | - | GH78 |
| CAZyme | HRGMv2_2939_7 | HRGMv2_2939_7_11 | 9902 | 16447 | - | GH163 |
| pfam | HRGMv2_2939_7 | HRGMv2_2939_7_12 | 16483 | 17664 | - | Big_2 | Big_2 | Big-like |
| CAZyme | HRGMv2_2939_7 | HRGMv2_2939_7_13 | 17677 | 19542 | - | GH163 |
| NULL(UNKNOWN) | HRGMv2_2939_7 | HRGMv2_2939_7_14 | 19555 | 22749 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2939_7 | HRGMv2_2939_7_15 | 22773 | 23708 | - | 3.A.1.1.36 |
Gene ID: HRGMv2_2939_7_9
Type: TC
Location: 7196 - 7912 (-)
Type: TC
Location: 7196 - 7912 (-)
Gene ID: HRGMv2_2939_7_10
Type: CAZyme
Location: 7914 - 9815 (-)
Type: CAZyme
Location: 7914 - 9815 (-)
Gene ID: HRGMv2_2939_7_11
Type: CAZyme
Location: 9902 - 16447 (-)
Type: CAZyme
Location: 9902 - 16447 (-)
Gene ID: HRGMv2_2939_7_12
Type: pfam
Location: 16483 - 17664 (-)
Type: pfam
Location: 16483 - 17664 (-)
Gene ID: HRGMv2_2939_7_13
Type: CAZyme
Location: 17677 - 19542 (-)
Type: CAZyme
Location: 17677 - 19542 (-)
Gene ID: HRGMv2_2939_7_14
Type:
Location: 19555 - 22749 (-)
Type:
Location: 19555 - 22749 (-)
Gene ID: HRGMv2_2939_7_15
Type: TC
Location: 22773 - 23708 (-)
Type: TC
Location: 22773 - 23708 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia sp934667815
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.