Cluster: HRGMv2_2939_CGC1
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 6
- Substrate:
- Genome ID: HRGMv2_2939
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2939_1 | HRGMv2_2939_1_58 | 35607 | 38462 | - | GH2 |
| TC | HRGMv2_2939_1 | HRGMv2_2939_1_59 | 38490 | 39839 | - | 2.A.66.1.23 |
| CAZyme | HRGMv2_2939_1 | HRGMv2_2939_1_60 | 39849 | 42170 | - | GH2 |
| STP | HRGMv2_2939_1 | HRGMv2_2939_1_61 | 42254 | 42880 | - | SIS |
| pfam | HRGMv2_2939_1 | HRGMv2_2939_1_62 | 42893 | 43834 | - | ROK |
| CAZyme | HRGMv2_2939_1 | HRGMv2_2939_1_63 | 43845 | 46151 | - | GH2 |
| pfam | HRGMv2_2939_1 | HRGMv2_2939_1_64 | 46166 | 46822 | - | Lipase_GDSL | Lipase_GDSL_2 |
| pfam | HRGMv2_2939_1 | HRGMv2_2939_1_65 | 46829 | 48067 | - | Lipase_GDSL_2 |
| CAZyme | HRGMv2_2939_1 | HRGMv2_2939_1_66 | 48081 | 50543 | - | GH94 |
| pfam | HRGMv2_2939_1 | HRGMv2_2939_1_67 | 50540 | 51511 | - | DUF4434 |
| CAZyme | HRGMv2_2939_1 | HRGMv2_2939_1_68 | 51508 | 54150 | - | GH94 |
| pfam | HRGMv2_2939_1 | HRGMv2_2939_1_69 | 54166 | 55713 | - | DUF4832 | DUF4874 |
| CAZyme | HRGMv2_2939_1 | HRGMv2_2939_1_70 | 55718 | 57898 | - | GH36 |
Gene ID: HRGMv2_2939_1_58
Type: CAZyme
Location: 35607 - 38462 (-)
Type: CAZyme
Location: 35607 - 38462 (-)
Gene ID: HRGMv2_2939_1_59
Type: TC
Location: 38490 - 39839 (-)
Type: TC
Location: 38490 - 39839 (-)
Gene ID: HRGMv2_2939_1_60
Type: CAZyme
Location: 39849 - 42170 (-)
Type: CAZyme
Location: 39849 - 42170 (-)
Gene ID: HRGMv2_2939_1_61
Type: STP
Location: 42254 - 42880 (-)
Type: STP
Location: 42254 - 42880 (-)
Gene ID: HRGMv2_2939_1_62
Type: pfam
Location: 42893 - 43834 (-)
Type: pfam
Location: 42893 - 43834 (-)
Gene ID: HRGMv2_2939_1_63
Type: CAZyme
Location: 43845 - 46151 (-)
Type: CAZyme
Location: 43845 - 46151 (-)
Gene ID: HRGMv2_2939_1_64
Type: pfam
Location: 46166 - 46822 (-)
Type: pfam
Location: 46166 - 46822 (-)
Gene ID: HRGMv2_2939_1_65
Type: pfam
Location: 46829 - 48067 (-)
Type: pfam
Location: 46829 - 48067 (-)
Gene ID: HRGMv2_2939_1_66
Type: CAZyme
Location: 48081 - 50543 (-)
Type: CAZyme
Location: 48081 - 50543 (-)
Gene ID: HRGMv2_2939_1_67
Type: pfam
Location: 50540 - 51511 (-)
Type: pfam
Location: 50540 - 51511 (-)
Gene ID: HRGMv2_2939_1_68
Type: CAZyme
Location: 51508 - 54150 (-)
Type: CAZyme
Location: 51508 - 54150 (-)
Gene ID: HRGMv2_2939_1_69
Type: pfam
Location: 54166 - 55713 (-)
Type: pfam
Location: 54166 - 55713 (-)
Gene ID: HRGMv2_2939_1_70
Type: CAZyme
Location: 55718 - 57898 (-)
Type: CAZyme
Location: 55718 - 57898 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia sp934667815
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.