Cluster: HRGMv2_2937_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2937
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2937_4 | HRGMv2_2937_4_88 | 106165 | 107829 | + | GH110 |
| TC | HRGMv2_2937_4 | HRGMv2_2937_4_89 | 107832 | 109190 | + | 2.A.38.1.1 |
| TC | HRGMv2_2937_4 | HRGMv2_2937_4_90 | 109215 | 110663 | + | 2.A.38.1.1 |
| pfam | HRGMv2_2937_4 | HRGMv2_2937_4_91 | 110676 | 111551 | + | DAP_epimerase | DAP_epimerase |
| TC | HRGMv2_2937_4 | HRGMv2_2937_4_92 | 111585 | 113009 | + | 2.A.66.1.28 |
Gene ID: HRGMv2_2937_4_88
Type: CAZyme
Location: 106165 - 107829 (+)
Type: CAZyme
Location: 106165 - 107829 (+)
Gene ID: HRGMv2_2937_4_89
Type: TC
Location: 107832 - 109190 (+)
Type: TC
Location: 107832 - 109190 (+)
Gene ID: HRGMv2_2937_4_90
Type: TC
Location: 109215 - 110663 (+)
Type: TC
Location: 109215 - 110663 (+)
Gene ID: HRGMv2_2937_4_91
Type: pfam
Location: 110676 - 111551 (+)
Type: pfam
Location: 110676 - 111551 (+)
Gene ID: HRGMv2_2937_4_92
Type: TC
Location: 111585 - 113009 (+)
Type: TC
Location: 111585 - 113009 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-448
Species
CAG-448 sp000433415
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.