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Cluster: HRGMv2_2937_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2937_2 HRGMv2_2937_2_82 98989 101310 - 3.A.11.1.3
pfam HRGMv2_2937_2 HRGMv2_2937_2_83 101541 101768 + PP-binding
TC HRGMv2_2937_2 HRGMv2_2937_2_84 101860 103176 - 2.A.25.1.9
pfam HRGMv2_2937_2 HRGMv2_2937_2_85 103419 103706 + Cpn10
pfam HRGMv2_2937_2 HRGMv2_2937_2_86 103739 105376 + Cpn60_TCP1
TC HRGMv2_2937_2 HRGMv2_2937_2_87 105525 107447 + 8.A.59.4.1
pfam HRGMv2_2937_2 HRGMv2_2937_2_88 107441 107794 - Hpt
STP HRGMv2_2937_2 HRGMv2_2937_2_89 107827 110010 - HATPase_c | HisKA | Response_reg
TC HRGMv2_2937_2 HRGMv2_2937_2_90 110017 110829 - 3.A.1.3.18
pfam HRGMv2_2937_2 HRGMv2_2937_2_91 111010 111909 - ABC2_membrane | ABC2_membrane_3
TC HRGMv2_2937_2 HRGMv2_2937_2_92 111906 112820 - 3.A.1.105.3
pfam HRGMv2_2937_2 HRGMv2_2937_2_93 113033 116227 - Cu_amine_oxidN1
TF HRGMv2_2937_2 HRGMv2_2937_2_94 116397 117248 + HTH_AraC
CAZyme HRGMv2_2937_2 HRGMv2_2937_2_95 117371 118561 + GH109
CAZyme HRGMv2_2937_2 HRGMv2_2937_2_96 118567 120378 + GH146
Gene ID: HRGMv2_2937_2_82
Type: TC
Location: 98989 - 101310 (-)
Gene ID: HRGMv2_2937_2_83
Type: pfam
Location: 101541 - 101768 (+)
Gene ID: HRGMv2_2937_2_84
Type: TC
Location: 101860 - 103176 (-)
Gene ID: HRGMv2_2937_2_85
Type: pfam
Location: 103419 - 103706 (+)
Gene ID: HRGMv2_2937_2_86
Type: pfam
Location: 103739 - 105376 (+)
Gene ID: HRGMv2_2937_2_87
Type: TC
Location: 105525 - 107447 (+)
Gene ID: HRGMv2_2937_2_88
Type: pfam
Location: 107441 - 107794 (-)
Gene ID: HRGMv2_2937_2_89
Type: STP
Location: 107827 - 110010 (-)
Gene ID: HRGMv2_2937_2_90
Type: TC
Location: 110017 - 110829 (-)
Gene ID: HRGMv2_2937_2_91
Type: pfam
Location: 111010 - 111909 (-)
Gene ID: HRGMv2_2937_2_92
Type: TC
Location: 111906 - 112820 (-)
Gene ID: HRGMv2_2937_2_93
Type: pfam
Location: 113033 - 116227 (-)
Gene ID: HRGMv2_2937_2_94
Type: TF
Location: 116397 - 117248 (+)
Gene ID: HRGMv2_2937_2_95
Type: CAZyme
Location: 117371 - 118561 (+)
Gene ID: HRGMv2_2937_2_96
Type: CAZyme
Location: 118567 - 120378 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
CAG-448
→
Species
CAG-448 sp000433415

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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