Cluster: HRGMv2_2937_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2937
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2937_1 | HRGMv2_2937_1_123 | 142383 | 145469 | + | GH106 |
| pfam | HRGMv2_2937_1 | HRGMv2_2937_1_124 | 145738 | 146448 | + | LRR_5 | LRR_5 |
| pfam | HRGMv2_2937_1 | HRGMv2_2937_1_125 | 146935 | 148455 | - | tRNA-synt_2 | tRNA_anti-codon |
| TC | HRGMv2_2937_1 | HRGMv2_2937_1_126 | 149503 | 151320 | + | 9.A.8.1.6 |
| CAZyme | HRGMv2_2937_1 | HRGMv2_2937_1_127 | 151710 | 154226 | + | CBM67 | GH78 |
| CAZyme | HRGMv2_2937_1 | HRGMv2_2937_1_128 | 154341 | 156335 | - | GH36 |
Gene ID: HRGMv2_2937_1_123
Type: CAZyme
Location: 142383 - 145469 (+)
Type: CAZyme
Location: 142383 - 145469 (+)
Gene ID: HRGMv2_2937_1_124
Type: pfam
Location: 145738 - 146448 (+)
Type: pfam
Location: 145738 - 146448 (+)
Gene ID: HRGMv2_2937_1_125
Type: pfam
Location: 146935 - 148455 (-)
Type: pfam
Location: 146935 - 148455 (-)
Gene ID: HRGMv2_2937_1_126
Type: TC
Location: 149503 - 151320 (+)
Type: TC
Location: 149503 - 151320 (+)
Gene ID: HRGMv2_2937_1_127
Type: CAZyme
Location: 151710 - 154226 (+)
Type: CAZyme
Location: 151710 - 154226 (+)
Gene ID: HRGMv2_2937_1_128
Type: CAZyme
Location: 154341 - 156335 (-)
Type: CAZyme
Location: 154341 - 156335 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-448
Species
CAG-448 sp000433415
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.