Cluster: HRGMv2_2937_CGC23
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2937
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2937_42 | HRGMv2_2937_42_5 | 2762 | 5155 | + | GH78 |
| TC | HRGMv2_2937_42 | HRGMv2_2937_42_6 | 5152 | 6036 | + | 2.A.115.1.1 |
| NULL(UNKNOWN) | HRGMv2_2937_42 | HRGMv2_2937_42_7 | 6300 | 6521 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2937_42 | HRGMv2_2937_42_8 | 6518 | 7762 | - | Rhodanese | ATP_bind_3 |
| TC | HRGMv2_2937_42 | HRGMv2_2937_42_9 | 8081 | 10678 | - | 3.A.3.5.15 |
Gene ID: HRGMv2_2937_42_5
Type: CAZyme
Location: 2762 - 5155 (+)
Type: CAZyme
Location: 2762 - 5155 (+)
Gene ID: HRGMv2_2937_42_6
Type: TC
Location: 5152 - 6036 (+)
Type: TC
Location: 5152 - 6036 (+)
Gene ID: HRGMv2_2937_42_7
Type:
Location: 6300 - 6521 (-)
Type:
Location: 6300 - 6521 (-)
Gene ID: HRGMv2_2937_42_8
Type: pfam
Location: 6518 - 7762 (-)
Type: pfam
Location: 6518 - 7762 (-)
Gene ID: HRGMv2_2937_42_9
Type: TC
Location: 8081 - 10678 (-)
Type: TC
Location: 8081 - 10678 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-448
Species
CAG-448 sp000433415
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.