Cluster: HRGMv2_2937_CGC22
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2937
- CGC Family ID: CGCFAM_05808
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2937_37 | HRGMv2_2937_37_5 | 2345 | 3586 | - | GH109 |
| NULL(UNKNOWN) | HRGMv2_2937_37 | HRGMv2_2937_37_6 | 3773 | 4030 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_2937_37 | HRGMv2_2937_37_7 | 4234 | 5166 | + | HTH_1 |
| TC | HRGMv2_2937_37 | HRGMv2_2937_37_8 | 5287 | 6150 | + | 3.A.1.24.5 |
| TC | HRGMv2_2937_37 | HRGMv2_2937_37_9 | 6224 | 7234 | + | 3.A.1.24.2 |
| TC | HRGMv2_2937_37 | HRGMv2_2937_37_10 | 7227 | 7925 | + | 3.A.1.24.5 |
Gene ID: HRGMv2_2937_37_5
Type: CAZyme
Location: 2345 - 3586 (-)
Type: CAZyme
Location: 2345 - 3586 (-)
Gene ID: HRGMv2_2937_37_6
Type:
Location: 3773 - 4030 (-)
Type:
Location: 3773 - 4030 (-)
Gene ID: HRGMv2_2937_37_7
Type: TF
Location: 4234 - 5166 (+)
Type: TF
Location: 4234 - 5166 (+)
Gene ID: HRGMv2_2937_37_8
Type: TC
Location: 5287 - 6150 (+)
Type: TC
Location: 5287 - 6150 (+)
Gene ID: HRGMv2_2937_37_9
Type: TC
Location: 6224 - 7234 (+)
Type: TC
Location: 6224 - 7234 (+)
Gene ID: HRGMv2_2937_37_10
Type: TC
Location: 7227 - 7925 (+)
Type: TC
Location: 7227 - 7925 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-448
Species
CAG-448 sp000433415
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.