Cluster: HRGMv2_2937_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2937
- CGC Family ID: CGCFAM_02396
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2937_34 | HRGMv2_2937_34_1 | 3 | 821 | + | 3.A.1.111.2 |
| TC | HRGMv2_2937_34 | HRGMv2_2937_34_2 | 806 | 2653 | + | 3.A.1.111.2 |
| TF | HRGMv2_2937_34 | HRGMv2_2937_34_3 | 3048 | 3356 | - | Trp_repressor |
| CAZyme | HRGMv2_2937_34 | HRGMv2_2937_34_4 | 3529 | 5259 | - | GH2 |
Gene ID: HRGMv2_2937_34_1
Type: TC
Location: 3 - 821 (+)
Type: TC
Location: 3 - 821 (+)
Gene ID: HRGMv2_2937_34_2
Type: TC
Location: 806 - 2653 (+)
Type: TC
Location: 806 - 2653 (+)
Gene ID: HRGMv2_2937_34_3
Type: TF
Location: 3048 - 3356 (-)
Type: TF
Location: 3048 - 3356 (-)
Gene ID: HRGMv2_2937_34_4
Type: CAZyme
Location: 3529 - 5259 (-)
Type: CAZyme
Location: 3529 - 5259 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-448
Species
CAG-448 sp000433415
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.