Cluster: HRGMv2_2937_CGC18
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2937
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2937_29 | HRGMv2_2937_29_1 | 141 | 1232 | - | 3.A.1.106.2 |
| TF | HRGMv2_2937_29 | HRGMv2_2937_29_2 | 1364 | 1639 | - | 0039939 |
| NULL(UNKNOWN) | HRGMv2_2937_29 | HRGMv2_2937_29_3 | 1617 | 1844 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2937_29 | HRGMv2_2937_29_4 | 2485 | 3834 | + | 2.A.40.1.4 |
| STP | HRGMv2_2937_29 | HRGMv2_2937_29_5 | 3958 | 5046 | - | HhH-GPD |
| CAZyme | HRGMv2_2937_29 | HRGMv2_2937_29_6 | 5039 | 7210 | - | GH78 |
| CAZyme | HRGMv2_2937_29 | HRGMv2_2937_29_7 | 7267 | 8652 | - | GH39 |
Gene ID: HRGMv2_2937_29_1
Type: TC
Location: 141 - 1232 (-)
Type: TC
Location: 141 - 1232 (-)
Gene ID: HRGMv2_2937_29_2
Type: TF
Location: 1364 - 1639 (-)
Type: TF
Location: 1364 - 1639 (-)
Gene ID: HRGMv2_2937_29_3
Type:
Location: 1617 - 1844 (-)
Type:
Location: 1617 - 1844 (-)
Gene ID: HRGMv2_2937_29_4
Type: TC
Location: 2485 - 3834 (+)
Type: TC
Location: 2485 - 3834 (+)
Gene ID: HRGMv2_2937_29_5
Type: STP
Location: 3958 - 5046 (-)
Type: STP
Location: 3958 - 5046 (-)
Gene ID: HRGMv2_2937_29_6
Type: CAZyme
Location: 5039 - 7210 (-)
Type: CAZyme
Location: 5039 - 7210 (-)
Gene ID: HRGMv2_2937_29_7
Type: CAZyme
Location: 7267 - 8652 (-)
Type: CAZyme
Location: 7267 - 8652 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-448
Species
CAG-448 sp000433415
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.