Cluster: HRGMv2_2937_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2937
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2937_26 | HRGMv2_2937_26_3 | 1541 | 3646 | + | GH106 |
| pfam | HRGMv2_2937_26 | HRGMv2_2937_26_4 | 3776 | 6319 | - | F5_F8_type_C | F5_F8_type_C | F5_F8_type_C_2 | F5_F8_type_C_2 |
| TC | HRGMv2_2937_26 | HRGMv2_2937_26_5 | 6848 | 8662 | + | 3.A.25.2.1 |
| NULL(UNKNOWN) | HRGMv2_2937_26 | HRGMv2_2937_26_6 | 8729 | 9160 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2937_26 | HRGMv2_2937_26_7 | 9157 | 10011 | - | 3.A.1.15.10 |
| TC | HRGMv2_2937_26 | HRGMv2_2937_26_8 | 10008 | 10721 | - | 3.A.1.15.13 |
Gene ID: HRGMv2_2937_26_3
Type: CAZyme
Location: 1541 - 3646 (+)
Type: CAZyme
Location: 1541 - 3646 (+)
Gene ID: HRGMv2_2937_26_4
Type: pfam
Location: 3776 - 6319 (-)
Type: pfam
Location: 3776 - 6319 (-)
Gene ID: HRGMv2_2937_26_5
Type: TC
Location: 6848 - 8662 (+)
Type: TC
Location: 6848 - 8662 (+)
Gene ID: HRGMv2_2937_26_6
Type:
Location: 8729 - 9160 (-)
Type:
Location: 8729 - 9160 (-)
Gene ID: HRGMv2_2937_26_7
Type: TC
Location: 9157 - 10011 (-)
Type: TC
Location: 9157 - 10011 (-)
Gene ID: HRGMv2_2937_26_8
Type: TC
Location: 10008 - 10721 (-)
Type: TC
Location: 10008 - 10721 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-448
Species
CAG-448 sp000433415
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.