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Cluster: HRGMv2_2937_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2937_23 HRGMv2_2937_23_17 18705 21434 - GH106
NULL(UNKNOWN) HRGMv2_2937_23 HRGMv2_2937_23_18 21524 22723 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2937_23 HRGMv2_2937_23_19 22713 24683 - GH13_39
CAZyme HRGMv2_2937_23 HRGMv2_2937_23_20 24738 27167 - GT35
CAZyme HRGMv2_2937_23 HRGMv2_2937_23_21 27210 28679 - GT5
pfam HRGMv2_2937_23 HRGMv2_2937_23_22 28715 29848 - NTP_transferase | Hexapep_GlmU
pfam HRGMv2_2937_23 HRGMv2_2937_23_23 29862 31052 - NTP_transferase | NTP_transf_3 | Hexapep_GlmU
CAZyme HRGMv2_2937_23 HRGMv2_2937_23_24 31081 33000 - GH13_9
TC HRGMv2_2937_23 HRGMv2_2937_23_25 33189 34307 + 3.A.1.132.1
Gene ID: HRGMv2_2937_23_17
Type: CAZyme
Location: 18705 - 21434 (-)
Gene ID: HRGMv2_2937_23_18
Type:
Location: 21524 - 22723 (-)
Gene ID: HRGMv2_2937_23_19
Type: CAZyme
Location: 22713 - 24683 (-)
Gene ID: HRGMv2_2937_23_20
Type: CAZyme
Location: 24738 - 27167 (-)
Gene ID: HRGMv2_2937_23_21
Type: CAZyme
Location: 27210 - 28679 (-)
Gene ID: HRGMv2_2937_23_22
Type: pfam
Location: 28715 - 29848 (-)
Gene ID: HRGMv2_2937_23_23
Type: pfam
Location: 29862 - 31052 (-)
Gene ID: HRGMv2_2937_23_24
Type: CAZyme
Location: 31081 - 33000 (-)
Gene ID: HRGMv2_2937_23_25
Type: TC
Location: 33189 - 34307 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
CAG-448
→
Species
CAG-448 sp000433415

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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