Cluster: HRGMv2_2937_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2937
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2937_20 | HRGMv2_2937_20_32 | 32209 | 34251 | + | CBM67 | GH78 |
| NULL(UNKNOWN) | HRGMv2_2937_20 | HRGMv2_2937_20_33 | 34330 | 34869 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_2937_20 | HRGMv2_2937_20_34 | 34952 | 35212 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2937_20 | HRGMv2_2937_20_35 | 35205 | 36335 | - | GH27 |
| pfam | HRGMv2_2937_20 | HRGMv2_2937_20_36 | 36413 | 37021 | - | Thymidylate_kin |
| TC | HRGMv2_2937_20 | HRGMv2_2937_20_37 | 37277 | 38287 | + | 8.A.21.2.3 |
Gene ID: HRGMv2_2937_20_32
Type: CAZyme
Location: 32209 - 34251 (+)
Type: CAZyme
Location: 32209 - 34251 (+)
Gene ID: HRGMv2_2937_20_33
Type:
Location: 34330 - 34869 (+)
Type:
Location: 34330 - 34869 (+)
Gene ID: HRGMv2_2937_20_34
Type:
Location: 34952 - 35212 (-)
Type:
Location: 34952 - 35212 (-)
Gene ID: HRGMv2_2937_20_35
Type: CAZyme
Location: 35205 - 36335 (-)
Type: CAZyme
Location: 35205 - 36335 (-)
Gene ID: HRGMv2_2937_20_36
Type: pfam
Location: 36413 - 37021 (-)
Type: pfam
Location: 36413 - 37021 (-)
Gene ID: HRGMv2_2937_20_37
Type: TC
Location: 37277 - 38287 (+)
Type: TC
Location: 37277 - 38287 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-448
Species
CAG-448 sp000433415
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.