dbCAN Logo

Cluster: HRGMv2_2937_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2937_1 HRGMv2_2937_1_88 98537 100624 - CBM67 | GH78
pfam HRGMv2_2937_1 HRGMv2_2937_1_89 100611 101642 - Radical_SAM | Radical_SAM_C
TC HRGMv2_2937_1 HRGMv2_2937_1_90 101817 102530 + 3.A.1.147.6
TC HRGMv2_2937_1 HRGMv2_2937_1_91 102524 104125 + 3.A.1.147.6
TF HRGMv2_2937_1 HRGMv2_2937_1_92 104360 105019 + 0038753
STP HRGMv2_2937_1 HRGMv2_2937_1_93 105060 106223 + SBP_bac_3
TC HRGMv2_2937_1 HRGMv2_2937_1_94 106207 107019 + 3.A.1.17.5
TC HRGMv2_2937_1 HRGMv2_2937_1_95 107006 107575 + 3.A.1.27.3
Gene ID: HRGMv2_2937_1_88
Type: CAZyme
Location: 98537 - 100624 (-)
Gene ID: HRGMv2_2937_1_89
Type: pfam
Location: 100611 - 101642 (-)
Gene ID: HRGMv2_2937_1_90
Type: TC
Location: 101817 - 102530 (+)
Gene ID: HRGMv2_2937_1_91
Type: TC
Location: 102524 - 104125 (+)
Gene ID: HRGMv2_2937_1_92
Type: TF
Location: 104360 - 105019 (+)
Gene ID: HRGMv2_2937_1_93
Type: STP
Location: 105060 - 106223 (+)
Gene ID: HRGMv2_2937_1_94
Type: TC
Location: 106207 - 107019 (+)
Gene ID: HRGMv2_2937_1_95
Type: TC
Location: 107006 - 107575 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
CAG-448
→
Species
CAG-448 sp000433415

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List