Cluster: HRGMv2_2935_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2935
- CGC Family ID: CGCFAM_10242
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2935_3 | HRGMv2_2935_3_61 | 77660 | 78229 | + | 4.F.1.1.7 |
| TC | HRGMv2_2935_3 | HRGMv2_2935_3_62 | 78268 | 79866 | + | 2.A.1.15.16 |
| pfam | HRGMv2_2935_3 | HRGMv2_2935_3_63 | 79890 | 80309 | + | Acetyltransf_1 |
| CAZyme | HRGMv2_2935_3 | HRGMv2_2935_3_64 | 80373 | 82007 | - | CBM6 | GH43_16 |
| CAZyme | HRGMv2_2935_3 | HRGMv2_2935_3_65 | 82034 | 83185 | - | GH5_4 |
Gene ID: HRGMv2_2935_3_61
Type: TC
Location: 77660 - 78229 (+)
Type: TC
Location: 77660 - 78229 (+)
Gene ID: HRGMv2_2935_3_62
Type: TC
Location: 78268 - 79866 (+)
Type: TC
Location: 78268 - 79866 (+)
Gene ID: HRGMv2_2935_3_63
Type: pfam
Location: 79890 - 80309 (+)
Type: pfam
Location: 79890 - 80309 (+)
Gene ID: HRGMv2_2935_3_64
Type: CAZyme
Location: 80373 - 82007 (-)
Type: CAZyme
Location: 80373 - 82007 (-)
Gene ID: HRGMv2_2935_3_65
Type: CAZyme
Location: 82034 - 83185 (-)
Type: CAZyme
Location: 82034 - 83185 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faeciplasma
Species
Faeciplasma sp900553675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.