Cluster: HRGMv2_2935_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2935
- CGC Family ID: CGCFAM_00783
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2935_3 | HRGMv2_2935_3_38 | 46338 | 47291 | + | 3.A.1.5.19 |
| TC | HRGMv2_2935_3 | HRGMv2_2935_3_39 | 47288 | 48847 | + | 3.A.1.5.19 |
| TC | HRGMv2_2935_3 | HRGMv2_2935_3_40 | 48849 | 51014 | + | 3.A.1.5.25 |
| TC | HRGMv2_2935_3 | HRGMv2_2935_3_41 | 51004 | 52239 | + | 3.A.1.5.19 |
| pfam | HRGMv2_2935_3 | HRGMv2_2935_3_42 | 52247 | 52645 | + | DUF3899 |
| CAZyme | HRGMv2_2935_3 | HRGMv2_2935_3_43 | 53084 | 55939 | + | GH141 |
Gene ID: HRGMv2_2935_3_38
Type: TC
Location: 46338 - 47291 (+)
Type: TC
Location: 46338 - 47291 (+)
Gene ID: HRGMv2_2935_3_39
Type: TC
Location: 47288 - 48847 (+)
Type: TC
Location: 47288 - 48847 (+)
Gene ID: HRGMv2_2935_3_40
Type: TC
Location: 48849 - 51014 (+)
Type: TC
Location: 48849 - 51014 (+)
Gene ID: HRGMv2_2935_3_41
Type: TC
Location: 51004 - 52239 (+)
Type: TC
Location: 51004 - 52239 (+)
Gene ID: HRGMv2_2935_3_42
Type: pfam
Location: 52247 - 52645 (+)
Type: pfam
Location: 52247 - 52645 (+)
Gene ID: HRGMv2_2935_3_43
Type: CAZyme
Location: 53084 - 55939 (+)
Type: CAZyme
Location: 53084 - 55939 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faeciplasma
Species
Faeciplasma sp900553675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.