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Cluster: HRGMv2_2935_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2935_37 HRGMv2_2935_37_1 128 2035 - 3.A.1.111.2
TC HRGMv2_2935_37 HRGMv2_2935_37_2 2028 3830 - 3.A.1.111.2
STP HRGMv2_2935_37 HRGMv2_2935_37_3 3990 4676 - HATPase_c
TF HRGMv2_2935_37 HRGMv2_2935_37_4 4686 5393 - LytTR
CAZyme HRGMv2_2935_37 HRGMv2_2935_37_5 5562 8912 - GH2
CAZyme HRGMv2_2935_37 HRGMv2_2935_37_6 8941 10071 - GH5_4
CAZyme HRGMv2_2935_37 HRGMv2_2935_37_7 10250 11251 - GH26
pfam HRGMv2_2935_37 HRGMv2_2935_37_8 11296 11802 - CBM_35
CAZyme HRGMv2_2935_37 HRGMv2_2935_37_9 11855 12739 - CE1
Gene ID: HRGMv2_2935_37_1
Type: TC
Location: 128 - 2035 (-)
Gene ID: HRGMv2_2935_37_2
Type: TC
Location: 2028 - 3830 (-)
Gene ID: HRGMv2_2935_37_3
Type: STP
Location: 3990 - 4676 (-)
Gene ID: HRGMv2_2935_37_4
Type: TF
Location: 4686 - 5393 (-)
Gene ID: HRGMv2_2935_37_5
Type: CAZyme
Location: 5562 - 8912 (-)
Gene ID: HRGMv2_2935_37_6
Type: CAZyme
Location: 8941 - 10071 (-)
Gene ID: HRGMv2_2935_37_7
Type: CAZyme
Location: 10250 - 11251 (-)
Gene ID: HRGMv2_2935_37_8
Type: pfam
Location: 11296 - 11802 (-)
Gene ID: HRGMv2_2935_37_9
Type: CAZyme
Location: 11855 - 12739 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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