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Cluster: HRGMv2_2935_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2935_32 HRGMv2_2935_32_1 235 1350 - 4.A.1.2.11
pfam HRGMv2_2935_32 HRGMv2_2935_32_2 1347 2162 - Radical_SAM | Fer4_12
pfam HRGMv2_2935_32 HRGMv2_2935_32_3 2191 2469 - DUF6171
CAZyme HRGMv2_2935_32 HRGMv2_2935_32_4 2485 3954 - GH51_1
pfam HRGMv2_2935_32 HRGMv2_2935_32_5 5205 5939 - ABC2_membrane | ABC2_membrane_3
TC HRGMv2_2935_32 HRGMv2_2935_32_6 5947 6696 - 3.A.1.105.1
STP HRGMv2_2935_32 HRGMv2_2935_32_7 6699 7277 - TetR_N
TC HRGMv2_2935_32 HRGMv2_2935_32_8 7966 11451 - 3.A.1.137.2
TC HRGMv2_2935_32 HRGMv2_2935_32_9 11469 12173 - 3.A.1.122.7
Gene ID: HRGMv2_2935_32_1
Type: TC
Location: 235 - 1350 (-)
Gene ID: HRGMv2_2935_32_2
Type: pfam
Location: 1347 - 2162 (-)
Gene ID: HRGMv2_2935_32_3
Type: pfam
Location: 2191 - 2469 (-)
Gene ID: HRGMv2_2935_32_4
Type: CAZyme
Location: 2485 - 3954 (-)
Gene ID: HRGMv2_2935_32_5
Type: pfam
Location: 5205 - 5939 (-)
Gene ID: HRGMv2_2935_32_6
Type: TC
Location: 5947 - 6696 (-)
Gene ID: HRGMv2_2935_32_7
Type: STP
Location: 6699 - 7277 (-)
Gene ID: HRGMv2_2935_32_8
Type: TC
Location: 7966 - 11451 (-)
Gene ID: HRGMv2_2935_32_9
Type: TC
Location: 11469 - 12173 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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