Cluster: HRGMv2_2935_CGC39
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2935
- CGC Family ID: CGCFAM_00196
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2935_29 | HRGMv2_2935_29_16 | 12098 | 13498 | + | GH43_35 |
| NULL(UNKNOWN) | HRGMv2_2935_29 | HRGMv2_2935_29_17 | 13677 | 13838 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_2935_29 | HRGMv2_2935_29_18 | 14030 | 14470 | + | MarR |
| TC | HRGMv2_2935_29 | HRGMv2_2935_29_19 | 14531 | 16255 | + | 3.A.1.135.5 |
| TC | HRGMv2_2935_29 | HRGMv2_2935_29_20 | 16248 | 18089 | + | 3.A.1.135.5 |
Gene ID: HRGMv2_2935_29_16
Type: CAZyme
Location: 12098 - 13498 (+)
Type: CAZyme
Location: 12098 - 13498 (+)
Gene ID: HRGMv2_2935_29_17
Type:
Location: 13677 - 13838 (+)
Type:
Location: 13677 - 13838 (+)
Gene ID: HRGMv2_2935_29_18
Type: TF
Location: 14030 - 14470 (+)
Type: TF
Location: 14030 - 14470 (+)
Gene ID: HRGMv2_2935_29_19
Type: TC
Location: 14531 - 16255 (+)
Type: TC
Location: 14531 - 16255 (+)
Gene ID: HRGMv2_2935_29_20
Type: TC
Location: 16248 - 18089 (+)
Type: TC
Location: 16248 - 18089 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faeciplasma
Species
Faeciplasma sp900553675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.