Cluster: HRGMv2_2935_CGC37
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2935
- CGC Family ID: CGCFAM_03940
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2935_26 | HRGMv2_2935_26_1 | 508 | 1461 | + | 3.A.1.122.7 |
| NULL(UNKNOWN) | HRGMv2_2935_26 | HRGMv2_2935_26_2 | 1521 | 3404 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2935_26 | HRGMv2_2935_26_3 | 3459 | 4907 | + | 3.A.1.122.12 |
| pfam | HRGMv2_2935_26 | HRGMv2_2935_26_4 | 5065 | 5334 | + | ParE_toxin |
| NULL(UNKNOWN) | HRGMv2_2935_26 | HRGMv2_2935_26_5 | 5348 | 5566 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2935_26 | HRGMv2_2935_26_6 | 5852 | 8257 | + | GT35 |
Gene ID: HRGMv2_2935_26_1
Type: TC
Location: 508 - 1461 (+)
Type: TC
Location: 508 - 1461 (+)
Gene ID: HRGMv2_2935_26_2
Type:
Location: 1521 - 3404 (+)
Type:
Location: 1521 - 3404 (+)
Gene ID: HRGMv2_2935_26_3
Type: TC
Location: 3459 - 4907 (+)
Type: TC
Location: 3459 - 4907 (+)
Gene ID: HRGMv2_2935_26_4
Type: pfam
Location: 5065 - 5334 (+)
Type: pfam
Location: 5065 - 5334 (+)
Gene ID: HRGMv2_2935_26_5
Type:
Location: 5348 - 5566 (+)
Type:
Location: 5348 - 5566 (+)
Gene ID: HRGMv2_2935_26_6
Type: CAZyme
Location: 5852 - 8257 (+)
Type: CAZyme
Location: 5852 - 8257 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faeciplasma
Species
Faeciplasma sp900553675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.