Cluster: HRGMv2_2935_CGC34
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2935
- CGC Family ID: CGCFAM_04795
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2935_21 | HRGMv2_2935_21_1 | 140 | 1735 | - | GH30 |
| pfam | HRGMv2_2935_21 | HRGMv2_2935_21_2 | 1862 | 2266 | - | Acetyltransf_1 | FR47 | Acetyltransf_7 | Acetyltransf_10 |
| NULL(UNKNOWN) | HRGMv2_2935_21 | HRGMv2_2935_21_3 | 2291 | 2785 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2935_21 | HRGMv2_2935_21_4 | 2924 | 4975 | - | 3.A.16.1.1 |
Gene ID: HRGMv2_2935_21_1
Type: CAZyme
Location: 140 - 1735 (-)
Type: CAZyme
Location: 140 - 1735 (-)
Gene ID: HRGMv2_2935_21_2
Type: pfam
Location: 1862 - 2266 (-)
Type: pfam
Location: 1862 - 2266 (-)
Gene ID: HRGMv2_2935_21_3
Type:
Location: 2291 - 2785 (-)
Type:
Location: 2291 - 2785 (-)
Gene ID: HRGMv2_2935_21_4
Type: TC
Location: 2924 - 4975 (-)
Type: TC
Location: 2924 - 4975 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faeciplasma
Species
Faeciplasma sp900553675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.