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Cluster: HRGMv2_2935_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2935_19 HRGMv2_2935_19_28 30105 31418 - GH10
CAZyme HRGMv2_2935_19 HRGMv2_2935_19_29 31426 32739 - GH10
pfam HRGMv2_2935_19 HRGMv2_2935_19_30 33082 33609 + ATP-synt_I
TC HRGMv2_2935_19 HRGMv2_2935_19_31 33609 34361 + 3.A.2.1.5
TC HRGMv2_2935_19 HRGMv2_2935_19_32 34453 34713 + 3.A.2.1.2
pfam HRGMv2_2935_19 HRGMv2_2935_19_33 34743 35297 + ATP-synt_B
pfam HRGMv2_2935_19 HRGMv2_2935_19_34 35294 35833 + OSCP
TC HRGMv2_2935_19 HRGMv2_2935_19_35 35873 37384 + 3.A.2.1.5
TC HRGMv2_2935_19 HRGMv2_2935_19_36 37437 38273 + 3.A.2.1.6
TC HRGMv2_2935_19 HRGMv2_2935_19_37 38309 39712 + 3.A.2.1.5
pfam HRGMv2_2935_19 HRGMv2_2935_19_38 39726 40142 + ATP-synt_DE | ATP-synt_DE_N
STP HRGMv2_2935_19 HRGMv2_2935_19_39 40895 41437 + Pribosyltran
TC HRGMv2_2935_19 HRGMv2_2935_19_40 41581 42987 + 2.A.40.1.4
Gene ID: HRGMv2_2935_19_28
Type: CAZyme
Location: 30105 - 31418 (-)
Gene ID: HRGMv2_2935_19_29
Type: CAZyme
Location: 31426 - 32739 (-)
Gene ID: HRGMv2_2935_19_30
Type: pfam
Location: 33082 - 33609 (+)
Gene ID: HRGMv2_2935_19_31
Type: TC
Location: 33609 - 34361 (+)
Gene ID: HRGMv2_2935_19_32
Type: TC
Location: 34453 - 34713 (+)
Gene ID: HRGMv2_2935_19_33
Type: pfam
Location: 34743 - 35297 (+)
Gene ID: HRGMv2_2935_19_34
Type: pfam
Location: 35294 - 35833 (+)
Gene ID: HRGMv2_2935_19_35
Type: TC
Location: 35873 - 37384 (+)
Gene ID: HRGMv2_2935_19_36
Type: TC
Location: 37437 - 38273 (+)
Gene ID: HRGMv2_2935_19_37
Type: TC
Location: 38309 - 39712 (+)
Gene ID: HRGMv2_2935_19_38
Type: pfam
Location: 39726 - 40142 (+)
Gene ID: HRGMv2_2935_19_39
Type: STP
Location: 40895 - 41437 (+)
Gene ID: HRGMv2_2935_19_40
Type: TC
Location: 41581 - 42987 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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