Cluster: HRGMv2_2935_CGC31
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2935
- CGC Family ID: CGCFAM_00200
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2935_18 | HRGMv2_2935_18_38 | 39207 | 39956 | - | 3.A.1.7.5 |
| TC | HRGMv2_2935_18 | HRGMv2_2935_18_39 | 39967 | 40836 | - | 3.A.1.7.2 |
| TC | HRGMv2_2935_18 | HRGMv2_2935_18_40 | 40833 | 41735 | - | 3.A.1.7.1 |
| pfam | HRGMv2_2935_18 | HRGMv2_2935_18_41 | 41762 | 42568 | - | PBP_like | PBP_like_2 | SBP_bac_11 |
| TF | HRGMv2_2935_18 | HRGMv2_2935_18_42 | 42921 | 43751 | + | HTH_AraC |
| CAZyme | HRGMv2_2935_18 | HRGMv2_2935_18_43 | 43784 | 45343 | + | GH43_16 |
Gene ID: HRGMv2_2935_18_38
Type: TC
Location: 39207 - 39956 (-)
Type: TC
Location: 39207 - 39956 (-)
Gene ID: HRGMv2_2935_18_39
Type: TC
Location: 39967 - 40836 (-)
Type: TC
Location: 39967 - 40836 (-)
Gene ID: HRGMv2_2935_18_40
Type: TC
Location: 40833 - 41735 (-)
Type: TC
Location: 40833 - 41735 (-)
Gene ID: HRGMv2_2935_18_41
Type: pfam
Location: 41762 - 42568 (-)
Type: pfam
Location: 41762 - 42568 (-)
Gene ID: HRGMv2_2935_18_42
Type: TF
Location: 42921 - 43751 (+)
Type: TF
Location: 42921 - 43751 (+)
Gene ID: HRGMv2_2935_18_43
Type: CAZyme
Location: 43784 - 45343 (+)
Type: CAZyme
Location: 43784 - 45343 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faeciplasma
Species
Faeciplasma sp900553675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.