Cluster: HRGMv2_2935_CGC30
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2935
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2935_17 | HRGMv2_2935_17_4 | 6394 | 8691 | - | GH95 |
| pfam | HRGMv2_2935_17 | HRGMv2_2935_17_5 | 8867 | 9967 | - | Aldo_ket_red | Fer4_8 | Fer4_9 | Fer4_10 | Fer4_17 |
| pfam | HRGMv2_2935_17 | HRGMv2_2935_17_6 | 10472 | 11116 | - | Hydrolase | HAD | Hydrolase_like | HAD_2 |
| TC | HRGMv2_2935_17 | HRGMv2_2935_17_7 | 11139 | 11711 | - | 2.A.107.1.2 |
Gene ID: HRGMv2_2935_17_4
Type: CAZyme
Location: 6394 - 8691 (-)
Type: CAZyme
Location: 6394 - 8691 (-)
Gene ID: HRGMv2_2935_17_5
Type: pfam
Location: 8867 - 9967 (-)
Type: pfam
Location: 8867 - 9967 (-)
Gene ID: HRGMv2_2935_17_6
Type: pfam
Location: 10472 - 11116 (-)
Type: pfam
Location: 10472 - 11116 (-)
Gene ID: HRGMv2_2935_17_7
Type: TC
Location: 11139 - 11711 (-)
Type: TC
Location: 11139 - 11711 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faeciplasma
Species
Faeciplasma sp900553675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.