Cluster: HRGMv2_2935_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2935
- CGC Family ID: CGCFAM_00060
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2935_1 | HRGMv2_2935_1_218 | 220224 | 222113 | - | GH30 |
| pfam | HRGMv2_2935_1 | HRGMv2_2935_1_219 | 222139 | 223164 | - | adh_short | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | KR | NAD_binding_10 | GDP_Man_Dehyd |
| CAZyme | HRGMv2_2935_1 | HRGMv2_2935_1_220 | 223198 | 224487 | - | GH30_8 |
| TC | HRGMv2_2935_1 | HRGMv2_2935_1_221 | 224497 | 225954 | - | 2.A.38.1.1 |
Gene ID: HRGMv2_2935_1_218
Type: CAZyme
Location: 220224 - 222113 (-)
Type: CAZyme
Location: 220224 - 222113 (-)
Gene ID: HRGMv2_2935_1_219
Type: pfam
Location: 222139 - 223164 (-)
Type: pfam
Location: 222139 - 223164 (-)
Gene ID: HRGMv2_2935_1_220
Type: CAZyme
Location: 223198 - 224487 (-)
Type: CAZyme
Location: 223198 - 224487 (-)
Gene ID: HRGMv2_2935_1_221
Type: TC
Location: 224497 - 225954 (-)
Type: TC
Location: 224497 - 225954 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faeciplasma
Species
Faeciplasma sp900553675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.