Cluster: HRGMv2_2935_CGC29
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2935
- CGC Family ID: CGCFAM_00002
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2935_16 | HRGMv2_2935_16_31 | 29487 | 30542 | - | GT4 |
| CAZyme | HRGMv2_2935_16 | HRGMv2_2935_16_32 | 30547 | 31308 | - | GT2 |
| pfam | HRGMv2_2935_16 | HRGMv2_2935_16_33 | 31420 | 31869 | - | Hexapep_2 | Hexapep_2 |
| TC | HRGMv2_2935_16 | HRGMv2_2935_16_34 | 31892 | 32587 | - | 9.B.18.1.2 |
Gene ID: HRGMv2_2935_16_31
Type: CAZyme
Location: 29487 - 30542 (-)
Type: CAZyme
Location: 29487 - 30542 (-)
Gene ID: HRGMv2_2935_16_32
Type: CAZyme
Location: 30547 - 31308 (-)
Type: CAZyme
Location: 30547 - 31308 (-)
Gene ID: HRGMv2_2935_16_33
Type: pfam
Location: 31420 - 31869 (-)
Type: pfam
Location: 31420 - 31869 (-)
Gene ID: HRGMv2_2935_16_34
Type: TC
Location: 31892 - 32587 (-)
Type: TC
Location: 31892 - 32587 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faeciplasma
Species
Faeciplasma sp900553675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.