Cluster: HRGMv2_2935_CGC25
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2935
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2935_13 | HRGMv2_2935_13_48 | 64796 | 66754 | - | 3.A.1.111.2 |
| TF | HRGMv2_2935_13 | HRGMv2_2935_13_49 | 66951 | 67793 | + | HTH_AraC | HTH_AraC |
| STP | HRGMv2_2935_13 | HRGMv2_2935_13_50 | 67890 | 69347 | - | SBP_bac_1 |
| TC | HRGMv2_2935_13 | HRGMv2_2935_13_51 | 69639 | 70442 | + | 1.A.23.2.1 |
| CAZyme | HRGMv2_2935_13 | HRGMv2_2935_13_52 | 70514 | 71209 | + | GH25 |
Gene ID: HRGMv2_2935_13_48
Type: TC
Location: 64796 - 66754 (-)
Type: TC
Location: 64796 - 66754 (-)
Gene ID: HRGMv2_2935_13_49
Type: TF
Location: 66951 - 67793 (+)
Type: TF
Location: 66951 - 67793 (+)
Gene ID: HRGMv2_2935_13_50
Type: STP
Location: 67890 - 69347 (-)
Type: STP
Location: 67890 - 69347 (-)
Gene ID: HRGMv2_2935_13_51
Type: TC
Location: 69639 - 70442 (+)
Type: TC
Location: 69639 - 70442 (+)
Gene ID: HRGMv2_2935_13_52
Type: CAZyme
Location: 70514 - 71209 (+)
Type: CAZyme
Location: 70514 - 71209 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faeciplasma
Species
Faeciplasma sp900553675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.