Cluster: HRGMv2_2935_CGC23
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2935
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2935_12 | HRGMv2_2935_12_38 | 41877 | 48929 | - | GH94 | GT84 |
| pfam | HRGMv2_2935_12 | HRGMv2_2935_12_39 | 49110 | 50318 | + | Metalloenzyme | PhosphMutase |
| pfam | HRGMv2_2935_12 | HRGMv2_2935_12_40 | 50531 | 51046 | + | Acetyltransf_1 | Acetyltransf_3 |
| CAZyme | HRGMv2_2935_12 | HRGMv2_2935_12_41 | 51287 | 53602 | - | GH3 |
| TF | HRGMv2_2935_12 | HRGMv2_2935_12_42 | 53950 | 54237 | - | HTH_3 |
| pfam | HRGMv2_2935_12 | HRGMv2_2935_12_43 | 54237 | 54596 | - | Gp49 |
| TC | HRGMv2_2935_12 | HRGMv2_2935_12_44 | 54858 | 56069 | - | 3.A.7.14.1 |
Gene ID: HRGMv2_2935_12_38
Type: CAZyme
Location: 41877 - 48929 (-)
Type: CAZyme
Location: 41877 - 48929 (-)
Gene ID: HRGMv2_2935_12_39
Type: pfam
Location: 49110 - 50318 (+)
Type: pfam
Location: 49110 - 50318 (+)
Gene ID: HRGMv2_2935_12_40
Type: pfam
Location: 50531 - 51046 (+)
Type: pfam
Location: 50531 - 51046 (+)
Gene ID: HRGMv2_2935_12_41
Type: CAZyme
Location: 51287 - 53602 (-)
Type: CAZyme
Location: 51287 - 53602 (-)
Gene ID: HRGMv2_2935_12_42
Type: TF
Location: 53950 - 54237 (-)
Type: TF
Location: 53950 - 54237 (-)
Gene ID: HRGMv2_2935_12_43
Type: pfam
Location: 54237 - 54596 (-)
Type: pfam
Location: 54237 - 54596 (-)
Gene ID: HRGMv2_2935_12_44
Type: TC
Location: 54858 - 56069 (-)
Type: TC
Location: 54858 - 56069 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faeciplasma
Species
Faeciplasma sp900553675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.