Cluster: HRGMv2_2935_CGC20
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2935
- CGC Family ID: CGCFAM_03378
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2935_11 | HRGMv2_2935_11_17 | 19732 | 21102 | + | 2.A.66.1.32 |
| pfam | HRGMv2_2935_11 | HRGMv2_2935_11_18 | 21113 | 21673 | + | Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10 |
| pfam | HRGMv2_2935_11 | HRGMv2_2935_11_19 | 21726 | 22166 | - | Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10 |
| CAZyme | HRGMv2_2935_11 | HRGMv2_2935_11_20 | 22209 | 23684 | - | GH29 |
| pfam | HRGMv2_2935_11 | HRGMv2_2935_11_21 | 23774 | 24655 | - | CN_hydrolase |
| STP | HRGMv2_2935_11 | HRGMv2_2935_11_22 | 24891 | 25502 | + | TetR_N |
| TC | HRGMv2_2935_11 | HRGMv2_2935_11_23 | 25506 | 26393 | + | 3.A.1.126.1 |
Gene ID: HRGMv2_2935_11_17
Type: TC
Location: 19732 - 21102 (+)
Type: TC
Location: 19732 - 21102 (+)
Gene ID: HRGMv2_2935_11_18
Type: pfam
Location: 21113 - 21673 (+)
Type: pfam
Location: 21113 - 21673 (+)
Gene ID: HRGMv2_2935_11_19
Type: pfam
Location: 21726 - 22166 (-)
Type: pfam
Location: 21726 - 22166 (-)
Gene ID: HRGMv2_2935_11_20
Type: CAZyme
Location: 22209 - 23684 (-)
Type: CAZyme
Location: 22209 - 23684 (-)
Gene ID: HRGMv2_2935_11_21
Type: pfam
Location: 23774 - 24655 (-)
Type: pfam
Location: 23774 - 24655 (-)
Gene ID: HRGMv2_2935_11_22
Type: STP
Location: 24891 - 25502 (+)
Type: STP
Location: 24891 - 25502 (+)
Gene ID: HRGMv2_2935_11_23
Type: TC
Location: 25506 - 26393 (+)
Type: TC
Location: 25506 - 26393 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faeciplasma
Species
Faeciplasma sp900553675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.