Cluster: HRGMv2_2935_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2935
- CGC Family ID: CGCFAM_04029
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2935_8 | HRGMv2_2935_8_12 | 15408 | 17138 | + | 1.A.11.2.7 |
| peptidase | HRGMv2_2935_8 | HRGMv2_2935_8_13 | 17407 | 18993 | + | C44.001 |
| TC | HRGMv2_2935_8 | HRGMv2_2935_8_14 | 19202 | 19738 | - | 1.A.22.1.4 |
| pfam | HRGMv2_2935_8 | HRGMv2_2935_8_15 | 20198 | 20998 | - | NAD_binding_2 | F420_oxidored | P5CR_dimer |
| pfam | HRGMv2_2935_8 | HRGMv2_2935_8_16 | 21044 | 21310 | - | RelB |
| CAZyme | HRGMv2_2935_8 | HRGMv2_2935_8_17 | 21583 | 23694 | + | GH3 |
Gene ID: HRGMv2_2935_8_12
Type: TC
Location: 15408 - 17138 (+)
Type: TC
Location: 15408 - 17138 (+)
Gene ID: HRGMv2_2935_8_13
Type: peptidase
Location: 17407 - 18993 (+)
Type: peptidase
Location: 17407 - 18993 (+)
Gene ID: HRGMv2_2935_8_14
Type: TC
Location: 19202 - 19738 (-)
Type: TC
Location: 19202 - 19738 (-)
Gene ID: HRGMv2_2935_8_15
Type: pfam
Location: 20198 - 20998 (-)
Type: pfam
Location: 20198 - 20998 (-)
Gene ID: HRGMv2_2935_8_16
Type: pfam
Location: 21044 - 21310 (-)
Type: pfam
Location: 21044 - 21310 (-)
Gene ID: HRGMv2_2935_8_17
Type: CAZyme
Location: 21583 - 23694 (+)
Type: CAZyme
Location: 21583 - 23694 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faeciplasma
Species
Faeciplasma sp900553675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.