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Cluster: HRGMv2_2935_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2935_7 HRGMv2_2935_7_49 57142 58188 + 3.A.1.11.8
TC HRGMv2_2935_7 HRGMv2_2935_7_50 58189 59001 + 3.A.1.11.8
TC HRGMv2_2935_7 HRGMv2_2935_7_51 58998 59828 + 3.A.1.11.1
TC HRGMv2_2935_7 HRGMv2_2935_7_52 59825 61081 + 3.A.1.11.7
STP HRGMv2_2935_7 HRGMv2_2935_7_53 61123 62280 + Pribosyltran
TC HRGMv2_2935_7 HRGMv2_2935_7_54 62500 65052 + 3.A.3.2.21
CAZyme HRGMv2_2935_7 HRGMv2_2935_7_55 65129 66088 - CE1
Gene ID: HRGMv2_2935_7_49
Type: TC
Location: 57142 - 58188 (+)
Gene ID: HRGMv2_2935_7_50
Type: TC
Location: 58189 - 59001 (+)
Gene ID: HRGMv2_2935_7_51
Type: TC
Location: 58998 - 59828 (+)
Gene ID: HRGMv2_2935_7_52
Type: TC
Location: 59825 - 61081 (+)
Gene ID: HRGMv2_2935_7_53
Type: STP
Location: 61123 - 62280 (+)
Gene ID: HRGMv2_2935_7_54
Type: TC
Location: 62500 - 65052 (+)
Gene ID: HRGMv2_2935_7_55
Type: CAZyme
Location: 65129 - 66088 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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