Cluster: HRGMv2_2935_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2935
- CGC Family ID: CGCFAM_02263
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2935_4 | HRGMv2_2935_4_36 | 44950 | 45921 | + | 3.A.1.1.11 |
| TC | HRGMv2_2935_4 | HRGMv2_2935_4_37 | 45935 | 47125 | + | 3.A.1.1.11 |
| pfam | HRGMv2_2935_4 | HRGMv2_2935_4_38 | 47535 | 47975 | + | Acetyltransf_1 | Acetyltransf_10 |
| TC | HRGMv2_2935_4 | HRGMv2_2935_4_39 | 48097 | 48654 | + | 3.A.1.25.5 |
| CAZyme | HRGMv2_2935_4 | HRGMv2_2935_4_40 | 48651 | 50261 | + | GH26 |
Gene ID: HRGMv2_2935_4_36
Type: TC
Location: 44950 - 45921 (+)
Type: TC
Location: 44950 - 45921 (+)
Gene ID: HRGMv2_2935_4_37
Type: TC
Location: 45935 - 47125 (+)
Type: TC
Location: 45935 - 47125 (+)
Gene ID: HRGMv2_2935_4_38
Type: pfam
Location: 47535 - 47975 (+)
Type: pfam
Location: 47535 - 47975 (+)
Gene ID: HRGMv2_2935_4_39
Type: TC
Location: 48097 - 48654 (+)
Type: TC
Location: 48097 - 48654 (+)
Gene ID: HRGMv2_2935_4_40
Type: CAZyme
Location: 48651 - 50261 (+)
Type: CAZyme
Location: 48651 - 50261 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faeciplasma
Species
Faeciplasma sp900553675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.