Cluster: HRGMv2_2935_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2935
- CGC Family ID: CGCFAM_10236
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2935_1 | HRGMv2_2935_1_55 | 59519 | 61789 | + | CBM35 | GH98 |
| CAZyme | HRGMv2_2935_1 | HRGMv2_2935_1_56 | 61810 | 64176 | + | CBM35 | GH98 |
| pfam | HRGMv2_2935_1 | HRGMv2_2935_1_57 | 64260 | 64424 | - | FeoB_associated |
| TC | HRGMv2_2935_1 | HRGMv2_2935_1_58 | 64438 | 66939 | - | 9.A.8.1.6 |
Gene ID: HRGMv2_2935_1_55
Type: CAZyme
Location: 59519 - 61789 (+)
Type: CAZyme
Location: 59519 - 61789 (+)
Gene ID: HRGMv2_2935_1_56
Type: CAZyme
Location: 61810 - 64176 (+)
Type: CAZyme
Location: 61810 - 64176 (+)
Gene ID: HRGMv2_2935_1_57
Type: pfam
Location: 64260 - 64424 (-)
Type: pfam
Location: 64260 - 64424 (-)
Gene ID: HRGMv2_2935_1_58
Type: TC
Location: 64438 - 66939 (-)
Type: TC
Location: 64438 - 66939 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faeciplasma
Species
Faeciplasma sp900553675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.