Cluster: HRGMv2_2932_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2932
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2932_5 | HRGMv2_2932_5_135 | 152229 | 152789 | + | 2.A.107.1.2 |
| pfam | HRGMv2_2932_5 | HRGMv2_2932_5_136 | 152790 | 153455 | + | VTT_dom |
| STP | HRGMv2_2932_5 | HRGMv2_2932_5_137 | 153693 | 154028 | - | FHA |
| TC | HRGMv2_2932_5 | HRGMv2_2932_5_138 | 154204 | 155667 | + | 2.A.6.5.1 |
| pfam | HRGMv2_2932_5 | HRGMv2_2932_5_139 | 155671 | 156285 | + | MMPL |
| CAZyme | HRGMv2_2932_5 | HRGMv2_2932_5_140 | 156288 | 157487 | + | GH3 |
Gene ID: HRGMv2_2932_5_135
Type: TC
Location: 152229 - 152789 (+)
Type: TC
Location: 152229 - 152789 (+)
Gene ID: HRGMv2_2932_5_136
Type: pfam
Location: 152790 - 153455 (+)
Type: pfam
Location: 152790 - 153455 (+)
Gene ID: HRGMv2_2932_5_137
Type: STP
Location: 153693 - 154028 (-)
Type: STP
Location: 153693 - 154028 (-)
Gene ID: HRGMv2_2932_5_138
Type: TC
Location: 154204 - 155667 (+)
Type: TC
Location: 154204 - 155667 (+)
Gene ID: HRGMv2_2932_5_139
Type: pfam
Location: 155671 - 156285 (+)
Type: pfam
Location: 155671 - 156285 (+)
Gene ID: HRGMv2_2932_5_140
Type: CAZyme
Location: 156288 - 157487 (+)
Type: CAZyme
Location: 156288 - 157487 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
F23-B02
Species
F23-B02 sp000431075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2932_5_140 | vegetarian > omnivore | 1.72646 | 0.00450 |
| HRGMv2_2932_5_140 | vegetarian > vegan | 1.67102 | 0.00363 |